Persist thread_dynamic_tools in sqlite and read first from it. Fall back
to rollout files if it's not found. Persist dynamic tools to both sqlite
and rollout files.
Saw that new sessions get populated to db correctly & old sessions get
backfilled correctly at startup:
```
celia@com-92114 codex-rs % sqlite3 ~/.codex/state.sqlite \ "select thread_id, position,name,description,input_schema from thread_dynamic_tools;"
019c0cad-ec0d-74b2-a787-e8b33a349117|0|geo_lookup|lookup a city|{"properties":{"city":{"type":"string"}},"required":["city"],"type":"object"}
....
019c10ca-aa4b-7620-ae40-c0919fbd7ea7|0|geo_lookup|lookup a city|{"properties":{"city":{"type":"string"}},"required":["city"],"type":"object"}
```
```
just log -h
if [ "${1:-}" = "--" ]; then shift; fi; cargo run -p codex-state --bin logs_client -- "$@"
Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.21s
Running `target/debug/logs_client -h`
Tail Codex logs from state.sqlite with simple filters
Usage: logs_client [OPTIONS]
Options:
--codex-home <CODEX_HOME> Path to CODEX_HOME. Defaults to $CODEX_HOME or ~/.codex [env: CODEX_HOME=]
--db <DB> Direct path to the SQLite database. Overrides --codex-home
--level <LEVEL> Log level to match exactly (case-insensitive)
--from <RFC3339|UNIX> Start timestamp (RFC3339 or unix seconds)
--to <RFC3339|UNIX> End timestamp (RFC3339 or unix seconds)
--module <MODULE> Substring match on module_path
--file <FILE> Substring match on file path
--backfill <BACKFILL> Number of matching rows to show before tailing [default: 200]
--poll-ms <POLL_MS> Poll interval in milliseconds [default: 500]
-h, --help Print help
```
Add a `.sqlite` database to be used to store rollout metatdata (and
later logs)
This PR is phase 1:
* Add the database and the required infrastructure
* Add a backfill of the database
* Persist the newly created rollout both in files and in the DB
* When we need to get metadata or a rollout, consider the `JSONL` as the
source of truth but compare the results with the DB and show any errors
